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(select first author, open access publications are linked below, please see Google Scholar for a full list of links to all publications)

Lofgren L, Ross B, Cramer R, Stajich J. The pan-genome of Aspergillus fumigatus provides a high-resolution view of its population structure revealing high levels of lineage-specific diversity driven by recombination. PLOS Biology. 2022 DOI: 10.1371/journal.pbio.3001890

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The definitive version is available at https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3001890

Lofgren L, Stajich J. Fungal Biodiversity and Conservation Mycology in light of New Technology, Big Data, and Changing Attitudes. Current Biology. 2021 DOI: 10.1016/j.cub.2021.06.083

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The definitive version is available at https://www.cell.com/current-biology/home

Lofgren L, Vilgalys R, Nguyen N, Ruytinx J, Liao H-L, Bronco S, Barry K, Kuo A, LaButti K, Lipzen A, Andreopoulos W, Pangilinan J, Riley R, Hundley H, Na H, Grigoriev I, Barry K, Stajich J, Kennedy P. Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. New Phytologist. 2021 DOI: 10.1111/nph.17160

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The definitive version is available at https://nph.onlinelibrary.wiley.com/doi/abs/10.1111/nph.17160

Lofgren L, Jessie K. Uehling, Sara Branco, Thomas D. Bruns, Francis Martin, Peter G. Kennedy. Genome-based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles Molecular Ecology. 2019 DOI: 10.1111/nph.15008